Agriculture Genomics Services
Providing specialized genomics and molecular biology services for crop improvement and sustainable agriculture.
Introduction
Agriculture in India is evolving rapidly with the integration of genomics and molecular tools. At Yaazh Xenomics, we provide specialized genomics and molecular biology services tailored to the needs of agricultural researchers, seed companies, plant breeders, FPOs, agri-biotech firms, and government research institutions.
Our ISO-certified laboratory combines cutting-edge platforms (Illumina NovaSeq, AVITI, Oxford Nanopore, PacBio, and Sanger sequencing) with deep expertise in microbial genomics and plant molecular biology to deliver actionable insights for crop improvement, soil health, disease management, and genetic resource conservation.
We are proud to collaborate with leading agricultural institutions, including our Memorandum of Agreement with Tamil Nadu Agricultural University (TNAU), to advance biotech applications in farming.
Why Partner With Yaazh Xenomics
Why Choose Us
• Strong focus on Indian crops, soil types, and farming systems • Expertise in microbial genomics and DNA barcoding — two critical areas for sustainable agriculture • Affordable pricing with special considerations for academic and government agricultural projects • Fast turnaround and dedicated project support • End-to-end service — from DNA extraction to publication-ready analysis and figures • Proven collaboration with Tamil Nadu Agricultural University (TNAU) • Robust data security and confidentiality for proprietary breeding programs
Who We Serve
- Agricultural universities and research institutes
- Seed companies and plant breeding programs
- Biofertilizer and biopesticide manufacturers
- FPOs and farmer producer organizations
- Agri-biotech startups
- Government departments and ICAR institutes
- Herbal and nutraceutical companies (raw material authentication)
Our Agriculture Genomics Services
1. DNA Barcoding for Plants & Seeds
Accurate species identification and authentication using standardized DNA barcode markers (rbcL, matK, ITS, COI, and others). Applications:
- ✓ Seed purity and varietal authentication
- ✓ Herbal raw material identification and supply chain traceability
- ✓ Detection of adulteration in agricultural commodities
- ✓ Biodiversity and germplasm characterization
- ✓ Identification of invasive species and weeds
2. Soil & Plant Microbiome
Comprehensive profiling of microbial communities in soil, rhizosphere, and plant tissues using 16S/18S rRNA and shotgun metagenomics. Applications:
- ✓ Soil health assessment and microbiome mapping
- ✓ Evaluation of biofertilizers and biocontrol agents
- ✓ Understanding plant-microbe interactions
- ✓ Monitoring impact of farming practices on soil biodiversity
- ✓ Development of microbial consortia for sustainable agriculture
3. Pathogen Detection
Molecular identification and genomic analysis of fungal, bacterial, and viral pathogens affecting crops. Applications:
- ✓ Early and accurate diagnosis of plant diseases
- ✓ Pathogen diversity and strain typing studies
- ✓ Development of resistant crop varieties
- ✓ Quarantine and biosecurity support
4. Crop Genome Sequencing
Whole genome sequencing and re-sequencing support for major and minor crops using short-read and long-read technologies. Applications: Trait mapping, varietal development, genetic diversity studies, and molecular breeding. Supported Crops Include:
- ✓ Rice, Wheat, Maize, Millets
- ✓ Pulses (Chickpea, Pigeon pea, Lentil, etc.)
- ✓ Oilseeds and Fiber crops
- ✓ Horticultural and plantation crops
- ✓ Medicinal and aromatic plants
5. Genotyping & SNP Discovery
High-throughput genotyping solutions for marker-assisted selection and breeding programs. Key Offerings:
- ✓ Genotyping-by-Sequencing (GBS) style approaches
- ✓ Reduced Representation Sequencing (similar to ddRAD / 2b-RAD)
- ✓ SNP discovery and validation
- ✓ Genetic diversity and population structure analysis
- ✓ DNA fingerprinting for variety protection
6. Livestock & Animal Genomics
Genomic solutions for livestock improvement and animal health. Services Include:
- ✓ Whole genome sequencing for cattle, buffalo, sheep, goat, poultry, and aquaculture species
- ✓ SNP genotyping for breeding value estimation
- ✓ Parentage verification and pedigree analysis
- ✓ Detection of genetic disorders and disease resistance markers
- ✓ Gut microbiome analysis in livestock for productivity and health
7. Gene Mapping & Molecular Breeding
Advanced tools to accelerate breeding programs:
- ✓ Bulked Segregant Analysis (BSA) support
- ✓ Genome-Wide Association Studies (GWAS) data analysis
- ✓ Genetic linkage mapping
- ✓ Association mapping and marker-trait association studies
- ✓ Pan-genome analysis support
8. Bioinformatics Analysis
End-to-end computational support tailored for agri-genomics projects:
- ✓ Genome assembly and annotation (short-read, long-read, and hybrid)
- ✓ Transcriptome analysis (RNA-Seq) for gene expression studies
- ✓ Metagenomic and metatranscriptomic analysis
- ✓ Phylogenetic and evolutionary analysis
- ✓ Variant calling, SNP annotation, and functional genomics
- ✓ Custom pipeline development and data visualization
9. Specialized Services
Additional specialized molecular biology and genomics support:
- ✓ Microsatellite (SSR) marker analysis
- ✓ T-DNA insertion analysis (for transgenic research)
- ✓ Custom gene expression studies
- ✓ Epigenetic analysis support (methylation profiling via Nanopore)
Technologies & Platforms We Use
Illumina NovaSeq X Plus & AVITI
High-throughput short-read sequencing for deep coverage and large-scale genotyping.
Oxford Nanopore
PromethION, GridION, and MinION — Long-read sequencing for complex genomes, structural variants, and real-time metagenomics.
PacBio HiFi
High-accuracy long-read sequencing for superior genome assemblies.
Sanger Sequencing
Gold-standard validation and targeted sequencing.